CDS

Accession Number TCMCG075C23601
gbkey CDS
Protein Id XP_017981575.1
Location complement(join(3540549..3540933,3541042..3541158,3541265..3541421,3541506..3541647,3541742..3541832,3541945..3542051,3542130..3542285,3542357..3542527,3542648..3542789,3542988..3543107,3543197..3543316,3543420..3543479,3543646..3543761))
Gene LOC18591838
GeneID 18591838
Organism Theobroma cacao

Protein

Length 627aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA341501
db_source XM_018126086.1
Definition PREDICTED: probable rhamnogalacturonate lyase B [Theobroma cacao]

EGGNOG-MAPPER Annotation

COG_category S
Description Rhamnogalacturonate lyase
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K18195        [VIEW IN KEGG]
EC 4.2.2.23        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs -

Sequence

CDS:  
ATGGATAATGGCAACCTCCAAGTCACAATATCAAAACCAGAGGGAATTGTCACCGGAGTCAGTTATCAAGGCATCGACAATTTGCTTGAAGTTCGTAACGAAGAATCCGATAGAGGGTACTGGGACCTTGTGTGGAGTGACGAAGGAACAGCAGGAACAGCAGGGACCTCTTATGTAATAAAAGGATCGAAATTCAGAGTGATCGTAGAAAATGAGGAACAAGTGGAAATCTCATTCACAAGAGCATGGAGTTCTTCTTTAGAGGGCAAGCACGTCCCTCTAAATATAGACAAAAGGTTCATAGTGCTTCGCGGATCCTCGGGCTTCTACTCCTACGCCATCTTTGAGCACTTGAAAGAGTGGCCTGGTTTCAACCTGCCACAAACCAGGATCGTGTTCAAGCTTAGAAAGGACAAGTTTCGCTACATGGCAGTAGCGGATAACAGGCAAAGGCGCATGCCCCTACCAGAGGACCGGTCTCCAAGAAGAAGTAGACCCCTCGCTTACCCTGAAGCTGCCCTACTTGTTCATCCCGTGGAGCCGGAGTTCAAAGGAGAGGTAGATGACAAGTATCAGTACTCCTGTGAGAACAAAGATCTTTACGTCCATGGATGGATATGCTCCAATCCACCAGTGGGGTGGTGGCAAATCACGCCAAGCAATGAGTTCCGATCTGGCGGACCAATGAAACAAAACCTTACTTCTCATGTTGGTCCTACAAATTTAGCTATGTTTCTTAGTGCTCACTACGTGGGAGAGGATATGGTGCTGAAGTTTCAACGTGGAGAACCATGGAAGAAAGTCTTTGGCCCCGTTTTCATTTATCTCAATACTTTGATTGATAACGATGATCCGCTTTGGCTATGGGAAGATGCTAAAGAACAGATGTTGACTGAAGTCCAGTGTTGGCCGTACAACTTCCCAGCTTCAGAGGATTTTCCGAAGTCGGAGCAGCGAGGTTGTGTTAGTGGTCGATTACAAGTCAGTGACAGGCATGTCAGCGACGACTATATATCAGCAAACGGTGCTTATGTGGGATTGGCACCACCAGGGGATGCCGGTTCATGGCAAACAGAAAGCAAGGGTTACCAATTCTGGACCAGGGCAGACGCAGATGGCTATTTCTTGATCAGCGATGTACGGACTGGTGACTATAATCTCTATGCTTGGGTCCCAGGTTTCATAGGGGATTACAAAAAAAGTGCCATCGTTACCATAACTCCAGGTTGTGATCTTGACATGGGTGACCTTGTCTATGAACCTCCAAGAGATGGGCGCACACTGTGGGAAATCGGCATCCCCGATAGAACTGCTGCAGAATTCTATGTTCCAGATCCTGATCCAAAGTATAGCAACAAACTATATGTGAACCACCCTGACCGGTTTAGGCAATACGGATTGTGGGAAAGATACGCAGATCTATACCCTAATGGAGATGTTGTTTACACCGTTGGTGTTAGTGACTACAGAACTGACTGGTTCTTTGCTCAAGTTACCAGGAAGAAAGATGATGATAAGTATAAAGGAACAGCATGGCAAATCAAGTTCAAACTTGATAACGTAGATCAAACTGGAACCTATAAACTTCGATTAGCTCTAGCAACCGCACATGTTGCAGAATTACAAGTCAGGATCAATAACCCAGACGCAAATCCTCCTGTGTTTACAACTGGAGTAATTGGGCATGACAACACCATTGCAAGGCATGGAATTCATGGACTATACCGGCTCTATAGCATAGATGTGAAGGGTGCTCTGCTTATTGAAGGAGAAAATACCATTTTCTTGACACAGCCAATGTGTAGCAGCGCTTTACAGGGGCTCATGTATGATTATATTCGTTTAGAAGCCCCACCTTCTAACAATTCCACCAACAAACTTTGA
Protein:  
MDNGNLQVTISKPEGIVTGVSYQGIDNLLEVRNEESDRGYWDLVWSDEGTAGTAGTSYVIKGSKFRVIVENEEQVEISFTRAWSSSLEGKHVPLNIDKRFIVLRGSSGFYSYAIFEHLKEWPGFNLPQTRIVFKLRKDKFRYMAVADNRQRRMPLPEDRSPRRSRPLAYPEAALLVHPVEPEFKGEVDDKYQYSCENKDLYVHGWICSNPPVGWWQITPSNEFRSGGPMKQNLTSHVGPTNLAMFLSAHYVGEDMVLKFQRGEPWKKVFGPVFIYLNTLIDNDDPLWLWEDAKEQMLTEVQCWPYNFPASEDFPKSEQRGCVSGRLQVSDRHVSDDYISANGAYVGLAPPGDAGSWQTESKGYQFWTRADADGYFLISDVRTGDYNLYAWVPGFIGDYKKSAIVTITPGCDLDMGDLVYEPPRDGRTLWEIGIPDRTAAEFYVPDPDPKYSNKLYVNHPDRFRQYGLWERYADLYPNGDVVYTVGVSDYRTDWFFAQVTRKKDDDKYKGTAWQIKFKLDNVDQTGTYKLRLALATAHVAELQVRINNPDANPPVFTTGVIGHDNTIARHGIHGLYRLYSIDVKGALLIEGENTIFLTQPMCSSALQGLMYDYIRLEAPPSNNSTNKL